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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4975965 chr5:46290389 A/G LOC647121 chr1:121260910-121313686:+ -0.37 -7.94 1.45E-14 Box Plot
THCA rs4975972 chr5:46297662 G/A LOC647121 chr1:121260910-121313686:+ -0.37 -7.95 1.31E-14 Box Plot
THCA rs4975977 chr5:46308090 C/T LOC647121 chr1:121260910-121313686:+ -0.38 -8.24 1.68E-15 Box Plot
THCA rs4975987 chr5:46327127 C/T LOC647121 chr1:121260910-121313686:+ -0.36 -7.68 9.08E-14 Box Plot
THCA rs4976636 chr5:176545092 A/G LOC388955 chr2:63849182-63850159:- -0.68 -17.33 1.42E-52 Box Plot
THCA rs4976637 chr5:176545142 G/A LOC388955 chr2:63849182-63850159:- -0.68 -17.33 1.42E-52 Box Plot
THCA rs4976639 chr5:176550301 A/C LOC388955 chr2:63849182-63850159:- 0.81 21.18 1.02E-70 Box Plot
THCA rs4976640 chr5:176552007 A/G LOC388955 chr2:63849182-63850159:- -0.69 -17.69 3.0E-54 Box Plot
THCA rs4976642 chr5:176673068 T/A LOC388955 chr2:63849182-63850159:- 0.74 19.22 2.14E-61 Box Plot
THCA rs4976676 chr5:176579540 T/C LOC388955 chr2:63849182-63850159:- -0.93 -24.54 1.2E-86 Box Plot
THCA rs4976680 chr5:176702746 T/C LOC388955 chr2:63849182-63850159:- 0.7 18.25 7.86E-57 Box Plot
THCA rs4976681 chr5:176704663 T/A LOC388955 chr2:63849182-63850159:- 0.7 18.25 7.86E-57 Box Plot
THCA rs4976682 chr5:176726002 A/G LOC388955 chr2:63849182-63850159:- 0.92 24.94 1.46E-88 Box Plot
THCA rs4980431 chr11:49350071 G/T FOLH1B chr11:89372395-89431886:+ -0.35 -6.12 1.95E-9 Box Plot
THCA rs4980435 chr11:49591576 G/A FOLH1B chr11:89372395-89431886:+ -0.35 -6.23 1.01E-9 Box Plot